feat: service-registry #396
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Reviewer's Guide by SourceryThis pull request introduces a new service-registry feature by implementing a suite of web components based on LitElement for managing service registrations. The changes include components for displaying services in a collection view, a form component for creating new services, API integration for fetching and creating service entries, as well as supporting configuration files, demos, documentation, and licensing updates. No diagrams generated as the changes look simple and do not need a visual representation. File-Level Changes
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Hey @anuragxxd - I've reviewed your changes and found some issues that need to be addressed.
Blocking issues:
Overall Comments:
- Clean up commented-out debug logs to keep the code tidy.
- Address or explicitly mark the pending implementation for the delete service functionality to clarify its status.
Here's what I looked at during the review
- 🟡 General issues: 2 issues found
- 🔴 Security: 2 blocking issues
- 🟢 Testing: all looks good
- 🟢 Complexity: all looks good
- 🟢 Documentation: all looks good
Help me be more useful! Please click 👍 or 👎 on each comment and I'll use the feedback to improve your reviews.
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| if (!response.ok) { | ||
| throw new Error("Failed to fetch services"); |
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suggestion (bug_risk): Enhance error handling with more specific error messages
Consider including the HTTP status code and response body in the error message to help with debugging. You could also create custom error types for different failure scenarios.
Suggested implementation:
if (!response.ok) {
const errorBody = await response.text();
throw new ServiceFetchError(
`Failed to fetch services: ${response.status} ${response.statusText}`,
response.status,
errorBody
);
}export class ServiceFetchError extends Error {
constructor(
message: string,
public status: number,
public body: string
) {
super(message);
this.name = 'ServiceFetchError';
}
}
export async function fetchServices(| # @elixir-cloud/service-registry | ||
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| The `@elixir-cloud/service-registry` package provides a suite of Web Components designed to interact with the Service Registry API. These components offer a user-friendly interface for managing service registrations within cloud environments. |
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suggestion: Expand the README to provide more context and details about the package's functionality.
The README could benefit from a more detailed explanation of the package's purpose and use cases. For example, mentioning specific functionalities like service registration, search, or management would be helpful. Also, clarifying the target cloud environment (e.g., GA4GH compliant clouds) would provide valuable context.
| # @elixir-cloud/service-registry | |
| The `@elixir-cloud/service-registry` package provides a suite of Web Components designed to interact with the Service Registry API. These components offer a user-friendly interface for managing service registrations within cloud environments. | |
| # @elixir-cloud/service-registry | |
| The `@elixir-cloud/service-registry` package provides a suite of Web Components designed to interact with the Service Registry API, specifically tailored for GA4GH (Global Alliance for Genomics and Health) compliant cloud environments. These components offer a user-friendly interface for discovering, registering, and managing bioinformatics services within the ELIXIR Cloud ecosystem. | |
| ## Overview | |
| This package is part of the ELIXIR Cloud Computing framework and enables seamless integration with GA4GH-compliant service registries. It helps researchers and developers to: | |
| - Discover available bioinformatics services and workflows | |
| - Register new services with standardized metadata | |
| - Manage and update existing service registrations | |
| - Search and filter services based on various criteria | |
| - Monitor service health and availability | |
| ## Key Features | |
| - **Service Discovery**: Easy-to-use components for searching and browsing available services | |
| - **Registration Management**: Intuitive interfaces for registering and updating services | |
| - **GA4GH Compliance**: Full support for GA4GH service registry specifications | |
| - **ELIXIR Integration**: Seamless integration with other ELIXIR Cloud services | |
| - **Customizable UI**: Flexible Web Components that can be styled to match your application |
| render( | ||
| html`<ecc-client-ga4gh-service-registry-create-service | ||
| baseURL="https://cloud-registry.2.rahtiapp.fi/ga4gh/registry/v1" | ||
| authToken="eyJraWQiOiJyc2ExIiwidHlwIjoiYXQrand0IiwiYWxnIjoiUlMyNTYifQ.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.rNoFlHqwToFM0Y77Mbhe2bwFFtOmHWwVZh-IrcuyfXX1FkhWY8RyX9tSxUwfem8ns7q40wxKfcrFq-LDK17IunnJT0JAB-_1_U-lfkhsKOO9eAY0UUJtRdoKI1qgp5teEb54EBpkX2twPlaPCI0DLQFRE46EZKWZUeRvOpuGEnwObO34iW0aNPXEUDw_gzG-_rdUNpb0MRlMwIbHUUba-9tHS33-TeuSpjxAJ_EMEt3TJfaYYEYHENhqzJxNtzK8DYwDENR82L9kwEzO497zMcsA99wlfXOtSCauwa5GbzV5rPgNVchiDkb-c877U0nQCIBs3gWsZHbCckRiegOvAA" |
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🚨 issue (security): Avoid hardcoding secrets in source code.
The authToken value appears to be a hardcoded secret. This is a security risk and should be avoided. Consider storing secrets securely and retrieving them during runtime.
| render( | ||
| html`<ecc-client-ga4gh-service-registry-services | ||
| baseURL="https://cloud-registry.2.rahtiapp.fi/ga4gh/registry/v1" | ||
| authToken="eyJraWQiOiJyc2ExIiwidHlwIjoiYXQrand0IiwiYWxnIjoiUlMyNTYifQ.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.rNoFlHqwToFM0Y77Mbhe2bwFFtOmHWwVZh-IrcuyfXX1FkhWY8RyX9tSxUwfem8ns7q40wxKfcrFq-LDK17IunnJT0JAB-_1_U-lfkhsKOO9eAY0UUJtRdoKI1qgp5teEb54EBpkX2twPlaPCI0DLQFRE46EZKWZUeRvOpuGEnwObO34iW0aNPXEUDw_gzG-_rdUNpb0MRlMwIbHUUba-9tHS33-TeuSpjxAJ_EMEt3TJfaYYEYHENhqzJxNtzK8DYwDENR82L9kwEzO497zMcsA99wlfXOtSCauwa5GbzV5rPgNVchiDkb-c877U0nQCIBs3gWsZHbCckRiegOvAA" |
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🚨 issue (security): Avoid hardcoding secrets in source code.
The authToken value appears to be a hardcoded secret. This is a security risk and should be avoided. Consider storing secrets securely and retrieving them during runtime.
| const data = await response.json(); | ||
| return data; |
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suggestion (code-quality): Inline variable that is immediately returned (inline-immediately-returned-variable)
| const data = await response.json(); | |
| return data; | |
| return await response.json(); | |
Explanation
Something that we often see in people's code is assigning to a result variableand then immediately returning it.
Returning the result directly shortens the code and removes an unnecessary
variable, reducing the mental load of reading the function.
Where intermediate variables can be useful is if they then get used as a
parameter or a condition, and the name can act like a comment on what the
variable represents. In the case where you're returning it from a function, the
function name is there to tell you what the result is, so the variable name
is unnecessary.
Description
Migrate Service Registry from https://github.com/elixir-cloud-aai/web-components
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